DNA Scanner
DNA Scanner compares synthetic DNA synthesis options across multiple vendors by evaluating sequence feasibility, cost, and delivery time to support procurement decisions.
Key Features:
- Cross-vendor comparison: Compares feasibility, pricing, and turnaround time for specific synthetic DNA sequences across multiple vendors.
- Feasibility assessment: Evaluates whether provided DNA sequences are synthesizable by vendors.
- Cost estimation: Compares pricing quotes for synthesizing specified DNA sequences.
- Delivery time estimation: Compares vendor turnaround times for DNA synthesis orders.
- Python API: Exposes a Python API for integration with computer-aided design tools and automated laboratory processes.
Scientific Applications:
- Vendor selection for DNA synthesis: Supports selection of optimal vendors based on sequence feasibility, price, and delivery time.
- Integration with design workflows: Enables integration of synthetic DNA ordering into computer-aided design workflows via the Python API.
- Laboratory automation and procurement: Facilitates automated laboratory processes and procurement workflows by providing comparative vendor information.
- Support for biofoundries and synthetic biology projects: Assists biofoundries and synthetic biology teams in planning and procuring synthetic DNA.
Methodology:
Performs automated comparisons of feasibility, pricing, and turnaround for provided DNA sequences and exposes a Python API for integration with computer-aided design tools and automated laboratory processes.
Topics
Details
- License:
- MIT
- Tool Type:
- web application
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 11/24/2024
Operations
Publications
Doçi G, Fuchs L, Kharbanda Y, Schickling P, Zulkower V, Hillson N, et al. . Synth Biol (Oxf). 2020;5(1).
PMCID: PMC7585645