DomainATM

DomainATM implements domain adaptation methods to reduce distribution differences across medical datasets, enabling integration and pooling of multi-site data to improve machine learning model generalization in medical image analysis and computer vision.


Key Features:

  • MATLAB implementation: Implemented in MATLAB to support algorithm execution and scripting.
  • Algorithm collection: Includes a collection of popular domain adaptation algorithms used in medical image analysis and computer vision.
  • Feature-level and image-level adaptation: Supports both feature-level and image-level adaptation approaches.
  • Customization and extensibility: Provides scripting interfaces to develop and test new adaptation methods.
  • Visualization and evaluation tools: Includes tools for visualizing data transformations and evaluating adaptation performance.
  • Multi-site data integration: Targets reduction of distribution differences to enable integration and pooling of data from multiple sites or centers.

Scientific Applications:

  • Medical image analysis: Adapts models across imaging datasets to improve generalization of diagnostic and predictive models.
  • Computer vision: Facilitates cross-dataset model adaptation for computer vision tasks relevant to medical imaging.
  • Multi-center studies: Enables pooling of heterogeneous datasets from multiple centers to increase statistical power in analyses.

Methodology:

DomainATM reduces distribution differences between disparate medical datasets using established domain adaptation techniques and supports both feature-level and image-level adaptation.

Topics

Details

Cost:
Free of charge
Tool Type:
desktop application
Programming Languages:
MATLAB
Added:
11/29/2023
Last Updated:
11/29/2023

Operations

Publications

Guan H, Liu M. DomainATM: Domain adaptation toolbox for medical data analysis. NeuroImage. 2023;268:119863. doi:10.1016/j.neuroimage.2023.119863. PMID:36610676. PMCID:PMC9908850.

PMID: 36610676
PMCID: PMC9908850
Funding: - National Institutes of Health: AG041721, AG073297

Documentation

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