Dots-on-Plots
Dots-on-Plots automates calculation of tensile mechanical properties from stress-strain curves to standardize characterization of soft tissues such as human meniscus.
Key Features:
- Automation: Automates calculation of tensile mechanical properties from stress-strain curves.
- Comprehensive analysis: Calculates properties at four critical points—transition, yield, ultimate, and rupture—and computes linear modulus, including strength, strain, and energy metrics.
- Optimized threshold settings: Implements a pre-determined optimal threshold of 2% stress deviation from a linear-region fit to minimize error when identifying the transition point.
- Validation and reliability: Validated on twenty tensile experiments of human meniscus, reproducing transition strain values (0.049 ± 0.007 compared to 0.050 ± 0.006).
- Sensitivity analysis: Performs sensitivity analysis using synthetic data sets to assess robustness across various curve shapes.
Scientific Applications:
- Soft tissue mechanics: Standardizes mechanical characterization of soft tissues for studies of tissue behavior and material properties.
- Comparative studies: Enables consistent comparison of tensile properties across experiments and cohorts.
- Large-scale tensile studies: Supports analysis workflows for multi-sample and collaborative studies of tissue mechanics.
Methodology:
Identifies key points on stress-strain curves (e.g., transition from nonlinear "toe" region to linear region), fits a linear-region model, applies a 2% stress-deviation threshold to detect the transition, and automates calculation of properties.
Topics
Details
- License:
- MIT
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 11/2/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Nesbitt DQ, Nelson ML, Shannon KS, Lujan TJ. Dots-on-Plots: A Web Application to Analyze Stress–Strain Curves From Tensile Tests of Soft Tissue. Journal of Biomechanical Engineering. 2022;145(2). doi:10.1115/1.4055593. PMID:36098481. PMCID:PMC9791671.
DOI: 10.1115/1.4055593
PMID: 36098481
PMCID: PMC9791671
Funding: - Division of Civil, Mechanical and Manufacturing Innovation: 1554353
- National Institute of Arthritis and Musculoskeletal and Skin Diseases: 1R15AR075314-01
Links
Repository
https://github.com/ntm-bsu/dots-on-plots