Dots-on-Plots

Dots-on-Plots automates calculation of tensile mechanical properties from stress-strain curves to standardize characterization of soft tissues such as human meniscus.


Key Features:

  • Automation: Automates calculation of tensile mechanical properties from stress-strain curves.
  • Comprehensive analysis: Calculates properties at four critical points—transition, yield, ultimate, and rupture—and computes linear modulus, including strength, strain, and energy metrics.
  • Optimized threshold settings: Implements a pre-determined optimal threshold of 2% stress deviation from a linear-region fit to minimize error when identifying the transition point.
  • Validation and reliability: Validated on twenty tensile experiments of human meniscus, reproducing transition strain values (0.049 ± 0.007 compared to 0.050 ± 0.006).
  • Sensitivity analysis: Performs sensitivity analysis using synthetic data sets to assess robustness across various curve shapes.

Scientific Applications:

  • Soft tissue mechanics: Standardizes mechanical characterization of soft tissues for studies of tissue behavior and material properties.
  • Comparative studies: Enables consistent comparison of tensile properties across experiments and cohorts.
  • Large-scale tensile studies: Supports analysis workflows for multi-sample and collaborative studies of tissue mechanics.

Methodology:

Identifies key points on stress-strain curves (e.g., transition from nonlinear "toe" region to linear region), fits a linear-region model, applies a 2% stress-deviation threshold to detect the transition, and automates calculation of properties.

Topics

Details

License:
MIT
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
11/2/2022
Last Updated:
11/24/2024

Operations

Publications

Nesbitt DQ, Nelson ML, Shannon KS, Lujan TJ. Dots-on-Plots: A Web Application to Analyze Stress–Strain Curves From Tensile Tests of Soft Tissue. Journal of Biomechanical Engineering. 2022;145(2). doi:10.1115/1.4055593. PMID:36098481. PMCID:PMC9791671.

PMID: 36098481
PMCID: PMC9791671
Funding: - Division of Civil, Mechanical and Manufacturing Innovation: 1554353 - National Institute of Arthritis and Musculoskeletal and Skin Diseases: 1R15AR075314-01

Links