drFAST
Software designed to map di-base reads (SOLiD color space reads) to reference genome assemblies; in a fast and memory-efficient manner.
Topics
Details
- Tool Type:
- command-line tool
- Operating Systems:
- Linux
- Added:
- 1/13/2017
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Query and retrieval
Inputs
Outputs
Publications
Hach F, Hormozdiari F, Alkan C, Hormozdiari F, Birol I, Eichler EE, Sahinalp SC. mrsFAST: a cache-oblivious algorithm for short-read mapping. Nature Methods. 2010;7(8):576-577. doi:10.1038/nmeth0810-576. PMID:20676076. PMCID:PMC3115707.