drfindresource
drfindresource locates and facilitates utilization of public molecular biology databases within the EMBOSS framework to support database-driven analyses.
Key Features:
- Integration with EMBOSS: Integrates with the European Molecular Biology Open Software Suite (EMBOSS) to operate within EMBOSS libraries and conventions.
- Discovery of public databases: Identifies relevant public molecular biology databases for downstream analyses.
- Database configuration and management: Supports configuration and management of databases under EMBOSS for use in analyses.
- EMBOSS C libraries: Leverages EMBOSS C programming libraries to enable development and extension of bioinformatics applications.
- Customization and extensibility: Supports ACD file development and enables API programming, wrapping, and porting of applications within EMBOSS.
Scientific Applications:
- Molecular biology research: Enables selection of public databases to support analyses such as genomic analysis and protein structure prediction.
- Tool development: Facilitates creation and extension of bioinformatics applications using EMBOSS C libraries and ACD files.
Methodology:
Integration with EMBOSS; use of EMBOSS C programming libraries; ACD file development; API programming, wrapping, and porting of applications; database configuration under EMBOSS.
Topics
Collections
Details
- License:
- GPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- C
- Added:
- 11/8/2015
- Last Updated:
- 12/10/2018
Operations
Publications
Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics. 2000;16(6):276-277. doi:10.1016/s0168-9525(00)02024-2.
Bleasby AJ, Ison JC, Rice PM. EMBOSS Administrator's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151399.
Ison JC, Rice PM, Bleasby AJ. EMBOSS Developer's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151405.