dsSurvival

dsSurvival performs privacy-preserving survival analysis by enabling federated meta-analysis of Cox proportional hazards models within the DataSHIELD framework to estimate hazard ratios without sharing individual-level data.


Key Features:

  • Privacy-Preserving Framework: Operates under a federated meta-analysis approach in which only anonymized aggregated data are exchanged between institutions.
  • Interactive Modeling: Supports exploratory and interactive modeling while avoiding manual intervention from data providers at each site.
  • Meta-Analysis of Cox Regression Models: Tailored for meta-analysis of Cox proportional hazards models and automates integration of results from individual studies.
  • Calculation of Hazard Ratios: Provides functionality to calculate hazard ratios for covariate effects in survival analyses.

Scientific Applications:

  • Multi-site survival studies: Enables large-scale biomedical survival analyses that combine data from multiple sources to achieve sufficient statistical power.
  • Collaborative federated meta-analysis: Supports cross-institutional meta-analysis of Cox models to estimate covariate effects while keeping patient-level data local.

Methodology:

Performs local analysis at individual study sites, exchanges anonymized aggregated summary statistics, and integrates results using meta-analytic techniques within the DataSHIELD framework.

Topics

Details

License:
GPL-3.0
Cost:
Free of charge
Tool Type:
library
Operating Systems:
Mac, Linux, Windows
Programming Languages:
R
Added:
9/18/2022
Last Updated:
11/24/2024

Operations

Publications

Banerjee S, Sofack GN, Papakonstantinou T, Avraam D, Burton P, Zöller D, Bishop TRP. dsSurvival: Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD. BMC Research Notes. 2022;15(1). doi:10.1186/s13104-022-06085-1. PMID:35659747. PMCID:PMC9166323.

PMID: 35659747
PMCID: PMC9166323
Funding: - EUCAN-Connect under the European Union’s Horizon 2020 research and innovation programme: grant agreement number 824989

Documentation

Links