dynamicLM
dynamicLM implements dynamic landmark models for survival analysis to produce time-updated risk predictions in the presence of competing risks and time-varying covariates.
Key Features:
- Landmark Model Implementation: Implements landmark models to generate dynamic, time-updated risk predictions for survival outcomes.
- Competing Risks Analysis: Handles competing risks by modeling multiple potential event types that can affect the primary outcome.
- Time-Varying Covariates: Incorporates time-varying covariates into landmark analyses to reflect changing risk factor values over time.
- Cause-Specific Landmark Models: Supports fitting cause-specific landmark models for separate analysis of distinct event causes under competing risks.
- Predictive Performance Evaluation: Provides predictive performance metrics including time-dependent area under the ROC curve, Brier Score, and calibration metrics.
Scientific Applications:
- Oncology: Enables dynamic prognostic modeling and competing-risk analysis for cancer progression and treatment response.
- Cardiology: Supports time-updated risk prediction and competing-event assessment for cardiovascular outcomes.
- Epidemiology: Facilitates cohort and population studies requiring longitudinal risk prediction with competing risks.
Methodology:
Integration of landmark models with competing-risks methods and incorporation of time-varying covariates; predictive performance assessed using time-dependent AUC, Brier Score, and calibration metrics.
Topics
Details
- License:
- GPL-3.0
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 3/18/2024
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Essential dynamics
Outputs
Publications
Fries AH, Choi E, Wu JT, Lee JH, Ding VY, Huang RJ, Liang S, Wakelee HA, Wilkens LR, Cheng I, Han SS. Software Application Profile:<i>dynamicLM</i>—a tool for performing dynamic risk prediction using a landmark supermodel for survival data under competing risks. International Journal of Epidemiology. 2023;52(6):1984-1989. doi:10.1093/ije/dyad122. PMID:37670428. PMCID:PMC10749764.