Echo-SyncNet
Echo-SyncNet synchronizes cardiac views in echocardiography without electrocardiogram (ECG) inputs by using self-supervised learning to temporally align cross-sectional 2D echo cine series for cardiac-phase correspondence.
Key Features:
- Self-supervised learning framework: Learns temporal alignment directly from input cine data using supervisory signals derived from the videos rather than ECG.
- Intra-view self-supervision: Utilizes temporal intra-view signals based on frame ordering and spatial intra-view signals based on spatial similarities between adjacent frames within a single cine.
- Inter-view self-supervision: Promotes similar embeddings for frames captured at identical cardiac phases across different echo views.
- Encoder-style convolutional neural network (CNN): Processes cardiac ultrasound videos to produce low-dimensional, feature-rich embedding sequences used for synchronization.
- Generalization across cardiac views: Operates without explicit assumptions about specific cardiac view types, enabling generalization to unseen views.
Scientific Applications:
- Synchronization of perpendicular cardiac views: Synchronized Apical 2 chamber and Apical 4 chamber views using data from 998 patients.
- Comparison to supervised methods: Learned representations outperformed a supervised deep learning method optimized for detecting fine-grained cardiac cycle phases in a study of 3,070 patients.
- One-shot learning for key-frame detection: Achieved key-frame detection by synchronizing validation patient studies with a single labeled reference cine across 1,188 patient studies without model fine-tuning.
Methodology:
Self-supervised training using intra-view temporal and spatial signals and inter-view embedding alignment, implemented with an encoder-style CNN that produces low-dimensional embeddings from 2D echocardiography cine sequences.
Topics
Details
- License:
- MIT
- Tool Type:
- command-line tool
- Programming Languages:
- Python
- Added:
- 9/8/2021
- Last Updated:
- 9/13/2021
Operations
Publications
Dezaki FT, Luong C, Ginsberg T, Rohling R, Gin K, Abolmaesumi P, Tsang T. Echo-SyncNet: Self-Supervised Cardiac View Synchronization in Echocardiography. IEEE Transactions on Medical Imaging. 2021;40(8):2092-2104. doi:10.1109/tmi.2021.3071951. PMID:33835916.