Echo-SyncNet

Echo-SyncNet synchronizes cardiac views in echocardiography without electrocardiogram (ECG) inputs by using self-supervised learning to temporally align cross-sectional 2D echo cine series for cardiac-phase correspondence.


Key Features:

  • Self-supervised learning framework: Learns temporal alignment directly from input cine data using supervisory signals derived from the videos rather than ECG.
  • Intra-view self-supervision: Utilizes temporal intra-view signals based on frame ordering and spatial intra-view signals based on spatial similarities between adjacent frames within a single cine.
  • Inter-view self-supervision: Promotes similar embeddings for frames captured at identical cardiac phases across different echo views.
  • Encoder-style convolutional neural network (CNN): Processes cardiac ultrasound videos to produce low-dimensional, feature-rich embedding sequences used for synchronization.
  • Generalization across cardiac views: Operates without explicit assumptions about specific cardiac view types, enabling generalization to unseen views.

Scientific Applications:

  • Synchronization of perpendicular cardiac views: Synchronized Apical 2 chamber and Apical 4 chamber views using data from 998 patients.
  • Comparison to supervised methods: Learned representations outperformed a supervised deep learning method optimized for detecting fine-grained cardiac cycle phases in a study of 3,070 patients.
  • One-shot learning for key-frame detection: Achieved key-frame detection by synchronizing validation patient studies with a single labeled reference cine across 1,188 patient studies without model fine-tuning.

Methodology:

Self-supervised training using intra-view temporal and spatial signals and inter-view embedding alignment, implemented with an encoder-style CNN that produces low-dimensional embeddings from 2D echocardiography cine sequences.

Topics

Details

License:
MIT
Tool Type:
command-line tool
Programming Languages:
Python
Added:
9/8/2021
Last Updated:
9/13/2021

Operations

Publications

Dezaki FT, Luong C, Ginsberg T, Rohling R, Gin K, Abolmaesumi P, Tsang T. Echo-SyncNet: Self-Supervised Cardiac View Synchronization in Echocardiography. IEEE Transactions on Medical Imaging. 2021;40(8):2092-2104. doi:10.1109/tmi.2021.3071951. PMID:33835916.

Links