EcoEvoApps

EcoEvoApps provides interactive R/Shiny applications that simulate canonical theoretical models in population dynamics, species interactions, and landscape ecology to facilitate exploration and application of ecological and evolutionary theory.


Key Features:

  • Interactive model simulations: Simulates theoretical models with visual outputs that allow evaluation of model structures and exploration of outcomes.
  • Parameter manipulation: Exposes model parameters for manipulation and simulation to assess parameter effects on model behavior.
  • Model overviews and implementation code: Includes model overviews accompanied by executable R code for replication and extension of analyses.
  • Focus on canonical models: Implements canonical models in population dynamics, species interactions, and landscape ecology.
  • Implementation platform: Built using R/Shiny.

Scientific Applications:

  • Theoretical exploration: Enables simulation-based exploration of predictions from models in population dynamics, species interactions, and landscape ecology.
  • Parameter sensitivity and behavior analysis: Facilitates assessment of how parameter variation influences ecological dynamics and evolutionary processes.
  • Reproducible model implementation: Supports replication and extension of theoretical analyses via provided R code.

Methodology:

Mathematical models are implemented in R/Shiny with visual simulations and executable R code that expose model parameters for simulation and analysis.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
R
Added:
11/5/2021
Last Updated:
11/5/2021

Operations

Publications

McGuire RM, Hayashi KT, Yan X, Caritá Vaz M, Cinoğlu D, Cowen MC, Martínez-Blancas A, Sullivan LL, Vazquez-Morales S, Kandlikar GS. EcoEvoApps: Interactive Apps for Theoretical Models in Ecology and Evolutionary Biology. Unknown Journal. 2021. doi:10.1101/2021.06.18.449026.