EcoEvoApps
EcoEvoApps provides interactive R/Shiny applications that simulate canonical theoretical models in population dynamics, species interactions, and landscape ecology to facilitate exploration and application of ecological and evolutionary theory.
Key Features:
- Interactive model simulations: Simulates theoretical models with visual outputs that allow evaluation of model structures and exploration of outcomes.
- Parameter manipulation: Exposes model parameters for manipulation and simulation to assess parameter effects on model behavior.
- Model overviews and implementation code: Includes model overviews accompanied by executable R code for replication and extension of analyses.
- Focus on canonical models: Implements canonical models in population dynamics, species interactions, and landscape ecology.
- Implementation platform: Built using R/Shiny.
Scientific Applications:
- Theoretical exploration: Enables simulation-based exploration of predictions from models in population dynamics, species interactions, and landscape ecology.
- Parameter sensitivity and behavior analysis: Facilitates assessment of how parameter variation influences ecological dynamics and evolutionary processes.
- Reproducible model implementation: Supports replication and extension of theoretical analyses via provided R code.
Methodology:
Mathematical models are implemented in R/Shiny with visual simulations and executable R code that expose model parameters for simulation and analysis.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 11/5/2021
- Last Updated:
- 11/5/2021
Operations
Publications
McGuire RM, Hayashi KT, Yan X, Caritá Vaz M, Cinoğlu D, Cowen MC, Martínez-Blancas A, Sullivan LL, Vazquez-Morales S, Kandlikar GS. EcoEvoApps: Interactive Apps for Theoretical Models in Ecology and Evolutionary Biology. Unknown Journal. 2021. doi:10.1101/2021.06.18.449026.