EFS

EFS performs ensemble feature selection to improve prediction performance and interpretability of binary classification models by normalizing and combining outputs from multiple feature selection methods into ensemble importance scores.


Key Features:

  • Ensemble Approach: Integrates multiple feature selection methods and combines their normalized outputs into a quantitative ensemble importance score for each feature to mitigate biases of individual methods.
  • Multiple Methods Integration: Incorporates eight distinct feature selection methods that can be applied individually or combined within the ensemble framework.
  • Improved Prediction Accuracy: Identifies relevant features that contribute to improved performance of downstream binary classification models on complex biological datasets.
  • Enhanced Interpretability: Prioritizes a subset of critical features via ensemble importance scores to facilitate interpretation of underlying biological processes.

Scientific Applications:

  • High-dimensional omics analysis: Selects informative features from high-dimensional datasets to support accurate and interpretable classification in genomics and proteomics studies.
  • Binary classification model development: Supports development and evaluation of binary classifiers by providing robust feature rankings that reduce method-specific bias.

Methodology:

EFS normalizes outputs from various feature selection methods and combines them into a unified ensemble importance score for each feature.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
R
Added:
8/6/2018
Last Updated:
12/10/2018

Operations

Publications

Neumann U, Genze N, Heider D. EFS: an ensemble feature selection tool implemented as R-package and web-application. BioData Mining. 2017;10(1). doi:10.1186/s13040-017-0142-8. PMID:28674556. PMCID:PMC5488355.

Documentation