EGAE
EGAE employs ensemble-based genetic algorithms to generate segmentation-based explanations that identify informative regions in medical images for melanoma cancer detection.
Key Features:
- Heuristic determination of chromosome sparsity: Heuristically determines chromosome sparsity to configure genetic algorithm representations for image segmentation.
- Consecutive execution of multiple genetic algorithms: Executes multiple genetic algorithms consecutively with different numbers of superpixels, producing variations in chromosome length to explore segmentation alternatives.
- Ensemble via consensus and majority voting: Ensembles outputs from multiple GAs using consensus and majority voting to integrate segmentation results.
- Euclidean distance accuracy metric: Quantifies explanation accuracy by computing the Euclidean distance between expert-delineated ground-truth explanations and explainer-generated explanations.
- Benchmarking against LIME: Evaluates explanation accuracy relative to Local Interpretable Model-agnostic Explanations (LIME) on melanoma datasets.
- Automatic identification of informative regions: Uses the ensemble GA process to automatically identify and present informative sections of medical images.
Scientific Applications:
- Melanoma cancer detection: Identifying informative lesions and supporting explanation of AI model decisions in melanoma image datasets.
- Explainable medical imaging: Providing segmentation-based explanations to assess and improve interpretability of image-analysis models.
- Comparative evaluation of explainers: Benchmarking and comparing explanation methods such as EGAE and LIME on annotated medical image datasets.
Methodology:
Three-phase process: heuristic determination of chromosome sparsity; consecutive execution of multiple genetic algorithms with varying superpixel counts yielding different chromosome lengths; ensembling of GA outputs via consensus and majority voting; accuracy measured by Euclidean distance to expert-delineated explanations.
Topics
Details
- License:
- MIT
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Programming Languages:
- Python
- Added:
- 3/19/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Nematzadeh H, García-Nieto J, Navas-Delgado I, Aldana-Montes JF. Ensemble-based genetic algorithm explainer with automized image segmentation: A case study on melanoma detection dataset. Computers in Biology and Medicine. 2023;155:106613. doi:10.1016/j.compbiomed.2023.106613. PMID:36764157.