embossupdate

embossupdate updates EMBOSS installations to provide access to the latest enhancements, bug fixes, and new features for bioinformatics analyses such as sequence analysis and structure prediction.


Key Features:

  • Integration with third-party software: Integrates over 200 third-party applications and software packages into the EMBOSS suite.
  • Database configuration and management: Supports configuration and management of databases used within the EMBOSS framework.
  • Development support: Provides C programming libraries, ACD file development facilities, and application programming interfaces (APIs) for developing EMBOSS applications.
  • Portability and extensibility: Supports wrapping and porting of third-party applications into the EMBOSS environment.

Scientific Applications:

  • Sequence analysis: Maintains up-to-date EMBOSS components used for nucleotide and protein sequence analysis workflows.
  • Structure prediction: Ensures availability of current EMBOSS components relevant to structure prediction and related bioinformatics analyses.

Methodology:

Performs regular checks for new EMBOSS releases and updates within the suite.

Topics

Collections

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
C
Added:
11/8/2015
Last Updated:
12/10/2018

Operations

Data Inputs & Outputs

Publications

Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics. 2000;16(6):276-277. doi:10.1016/s0168-9525(00)02024-2.

Bleasby AJ, Ison JC, Rice PM. EMBOSS Administrator's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151399.

Ison JC, Rice PM, Bleasby AJ. EMBOSS Developer's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151405.

Documentation

Downloads

Links