emma

emma provides a suite of more than 200 integrated applications for molecular biology analyses, and includes C programming libraries and ACD (Application Configuration Definition) files to enable extensibility and integration with third-party software packages.


Key Features:

  • Extensive Application Suite: Offers more than 200 integrated applications covering a broad range of molecular biology tasks.
  • Integration and Compatibility: Interoperates with third-party software packages to support combined analyses and workflows.
  • Development Libraries: Includes C programming libraries for developing and extending bioinformatics tools.
  • Customization via ACD files: Supports application configuration and customization through ACD (Application Configuration Definition) files.
  • Analytical Scope: Supports sequence analysis and database management tasks relevant to molecular biology.
  • Tool Development Support: Provides infrastructure to develop new bioinformatics applications using the included libraries and configuration files.

Scientific Applications:

  • Sequence Analysis: Conducts sequence-related analyses using the integrated applications.
  • Database Management: Manages and queries sequence databases as part of molecular biology workflows.
  • Bioinformatics Tool Development: Enables development and extension of bioinformatics tools using C libraries and ACD files.

Methodology:

Provides a suite of more than 200 integrated applications, C programming libraries, and ACD (Application Configuration Definition) files for computational molecular biology analyses and integration with third-party software.

Topics

Collections

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
C
Added:
11/8/2015
Last Updated:
12/10/2018

Operations

Publications

Bleasby AJ, Ison JC, Rice PM. EMBOSS Administrator's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151399.

Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics. 2000;16(6):276-277. doi:10.1016/s0168-9525(00)02024-2.

Ison JC, Rice PM, Bleasby AJ. EMBOSS Developer's Guide. Unknown Journal. 2011. doi:10.1017/cbo9781139151405.

Documentation

Downloads

Links