Enzyme Portal - Protein sequence search

Enzyme Portal - Protein sequence search provides integrated retrieval and aggregation of enzyme-related data via protein sequence queries to support analysis of enzymatic activity, biochemical reactions, biological pathways, small molecule chemistry, disease associations, 3D protein structures, and related scientific literature.


Key Features:

  • Integrated Data Access: Aggregates datasets covering biochemical reactions, biological pathways, small molecule chemistry, disease associations, 3D protein structures, and scientific literature.
  • Protein Sequence Search: Retrieves information specifically linked to protein sequences with enzymatic activity through sequence-based queries.
  • Comprehensive Search Capabilities: Enables advanced searches to obtain detailed enzyme-related information across the integrated datasets.

Scientific Applications:

  • Enzyme Function Analysis: Supports investigation of enzyme functions and roles in biological systems through integrated reaction and pathway data.
  • Disease Research: Facilitates exploration of associations between enzymes and diseases using integrated disease-related data.
  • Structural Biology: Provides access to 3D protein structures for analysis of enzyme conformations and molecular interactions.
  • Literature Integration: Links enzymatic data with relevant scientific literature to support literature reviews and meta-analyses.

Methodology:

No computational algorithms or implementation details are specified in the provided description.

Topics

Collections

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
1/29/2015
Last Updated:
11/25/2024

Operations

Publications

de Matos P, Cham JA, Cao H, Alcántara R, Rowland F, Lopez R, Steinbeck C. The Enzyme Portal: a case study in applying user-centred design methods in bioinformatics. BMC Bioinformatics. 2013;14(1). doi:10.1186/1471-2105-14-103. PMID:23514033. PMCID:PMC3623738.

Documentation

Links