ER-CoV

ER-CoV applies a machine learning classifier to routine blood-examination data to triage emergency-room patients for likely SARS-CoV-2 infection.


Key Features:

  • Machine learning classifier: Uses a machine learning classifier trained on routine blood-test data to predict SARS-CoV-2 infection status.
  • High specificity and NPV: Reported average specificity of 85.98% and negative predictive value (NPV) of 94.92%.
  • Sensitivity, PPV, and AUC: Reported average sensitivity of 70.25%, positive predictive value (PPV) of 44.96%, and area under the curve (AUC) of 86.78%.
  • Dataset and inputs: Analysis focused on 599 subjects with complete data across 16 common blood exams drawn from an initial cohort of 5,644 patients; 81 subjects were confirmed positive by RT-PCR for SARS-CoV-2.
  • Training objective: Model was trained to predict COVID-19 negativity with a priority on achieving high specificity and NPV.
  • Reduced testing burden: Estimated potential to reduce the number of SARS-CoV-2 tests conducted in emergency settings by at least 90%.
  • Error analysis: Approximately 28% of false negatives were estimated to have been hospitalized regardless of the prediction.
  • Patient management optimization: Enables immediate segregation of patients predicted as positive to reduce in-hospital transmission risk.

Scientific Applications:

  • Efficient triage: Rapidly identify likely negative cases to prioritize confirmatory RT-PCR testing for higher-risk patients.
  • Resource allocation: Reduce unnecessary SARS-CoV-2 testing and hospital admissions to aid allocation of limited medical resources.
  • Infection control: Support rapid separation of suspected positive patients to mitigate nosocomial spread of SARS-CoV-2.

Methodology:

Developed via a case-control quantitative study using data from 5,644 patients, with analysis on 599 subjects with complete data across 16 common blood exams (81 RT-PCR positives), and the AI model trained to predict COVID-19 negativity prioritizing high specificity and NPV.

Topics

Collections

Details

License:
GPL-3.0
Tool Type:
workflow
Programming Languages:
R
Added:
1/18/2021
Last Updated:
3/8/2021

Operations

Publications

Soares F. A novel specific artificial intelligence-based method to identify COVID-19 cases using simple blood exams. Unknown Journal. 2020. doi:10.1101/2020.04.10.20061036.