Eval
Eval evaluates gene-structure prediction programs by computing statistical summaries and graphical distributions to assess the performance of annotation sets.
Key Features:
- Flexibility: Handles diverse annotation sets from different sources for analysis.
- Statistical Summaries: Generates detailed statistical summaries describing performance metrics of gene-structure predictions.
- Graphical Distributions: Produces graphical distributions to visualize annotation statistics.
- Comparative Analysis: Performs comparisons between prediction sets and against standard annotations.
Scientific Applications:
- Performance Evaluation: Assess the performance of gene-structure prediction programs using statistical and graphical metrics.
- Annotation Comparison: Compare multiple annotation sets to identify differences among gene-structure predictions.
- Visualization for Interpretation: Visualize distributions of statistics to support interpretation and reporting of prediction results.
Methodology:
Computes statistical summaries, generates graphical distributions, and conducts comparative analyses between prediction sets and reference annotations.
Topics
Details
- Tool Type:
- workflow
- Programming Languages:
- Perl
- Added:
- 5/26/2021
- Last Updated:
- 6/25/2021
Operations
Publications
Keibler E, Brent MR. Eval: A software package for analysis of genome annotations. BMC Bioinformatics. 2003;4(1). doi:10.1186/1471-2105-4-50. PMID:14565849. PMCID:PMC270064.