Eval

Eval evaluates gene-structure prediction programs by computing statistical summaries and graphical distributions to assess the performance of annotation sets.


Key Features:

  • Flexibility: Handles diverse annotation sets from different sources for analysis.
  • Statistical Summaries: Generates detailed statistical summaries describing performance metrics of gene-structure predictions.
  • Graphical Distributions: Produces graphical distributions to visualize annotation statistics.
  • Comparative Analysis: Performs comparisons between prediction sets and against standard annotations.

Scientific Applications:

  • Performance Evaluation: Assess the performance of gene-structure prediction programs using statistical and graphical metrics.
  • Annotation Comparison: Compare multiple annotation sets to identify differences among gene-structure predictions.
  • Visualization for Interpretation: Visualize distributions of statistics to support interpretation and reporting of prediction results.

Methodology:

Computes statistical summaries, generates graphical distributions, and conducts comparative analyses between prediction sets and reference annotations.

Topics

Details

Tool Type:
workflow
Programming Languages:
Perl
Added:
5/26/2021
Last Updated:
6/25/2021

Operations

Publications

Keibler E, Brent MR. Eval: A software package for analysis of genome annotations. BMC Bioinformatics. 2003;4(1). doi:10.1186/1471-2105-4-50. PMID:14565849. PMCID:PMC270064.

Documentation