ExoCarta

ExoCarta catalogs exosomal proteins, mRNA, miRNA, and lipids to provide a comprehensive resource for analysis of exosome molecular composition and identification of molecular signatures across tissues and cell types.


Key Features:

  • Curated molecular catalog: Curated listing of exosomal proteins, mRNA, miRNA, and lipid entries derived from exosomal studies.
  • Content scope (v3.1): Version 3.1 contains 11,261 protein entries, 2,375 mRNA entries, and 764 miRNA entries from 134 distinct exosomal studies and includes lipid entries added in v3.1.
  • Study provenance: Aggregates data from both published and unpublished exosomal studies.
  • Methodological annotation: Documents methods used for exosomal purification and characterization and records biophysical and molecular properties.
  • Quality assessment data: Provides information useful for assessing the quality of exosomal preparations and corresponding experimental data.
  • Molecular signature support: Enables identification and comparison of molecular signatures associated with tissue- or cell type–derived exosomes.

Scientific Applications:

  • Comparative composition analysis: Comparative analysis of exosomal proteomic, mRNA, miRNA, and lipid composition across studies.
  • Biomarker and signature discovery: Identification of tissue- or cell type–specific exosomal molecular signatures for biomarker research.
  • Quality control and reproducibility: Assessment of exosome preparation quality and evaluation of experimental reproducibility.
  • Exosome biology studies: Investigation of exosome roles in intercellular communication and related biological processes.
  • Therapeutic research support: Informing studies on potential therapeutic applications of exosomes based on molecular composition.

Methodology:

Meticulous curation and aggregation of published and unpublished exosomal proteomic, mRNA, miRNA, and lipid datasets with annotation of purification and characterization methods and associated biophysical and molecular properties.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Python
Added:
3/30/2017
Last Updated:
12/10/2018

Operations

Publications

Mathivanan S, et al. ExoCarta 2012: database of exosomal proteins, RNA and lipids. Nucleic Acids Res. 2012; 40:D1241-4. doi: 10.1093/nar/gkr828

PMID: 21989406