ExoCarta
ExoCarta catalogs exosomal proteins, mRNA, miRNA, and lipids to provide a comprehensive resource for analysis of exosome molecular composition and identification of molecular signatures across tissues and cell types.
Key Features:
- Curated molecular catalog: Curated listing of exosomal proteins, mRNA, miRNA, and lipid entries derived from exosomal studies.
- Content scope (v3.1): Version 3.1 contains 11,261 protein entries, 2,375 mRNA entries, and 764 miRNA entries from 134 distinct exosomal studies and includes lipid entries added in v3.1.
- Study provenance: Aggregates data from both published and unpublished exosomal studies.
- Methodological annotation: Documents methods used for exosomal purification and characterization and records biophysical and molecular properties.
- Quality assessment data: Provides information useful for assessing the quality of exosomal preparations and corresponding experimental data.
- Molecular signature support: Enables identification and comparison of molecular signatures associated with tissue- or cell type–derived exosomes.
Scientific Applications:
- Comparative composition analysis: Comparative analysis of exosomal proteomic, mRNA, miRNA, and lipid composition across studies.
- Biomarker and signature discovery: Identification of tissue- or cell type–specific exosomal molecular signatures for biomarker research.
- Quality control and reproducibility: Assessment of exosome preparation quality and evaluation of experimental reproducibility.
- Exosome biology studies: Investigation of exosome roles in intercellular communication and related biological processes.
- Therapeutic research support: Informing studies on potential therapeutic applications of exosomes based on molecular composition.
Methodology:
Meticulous curation and aggregation of published and unpublished exosomal proteomic, mRNA, miRNA, and lipid datasets with annotation of purification and characterization methods and associated biophysical and molecular properties.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Python
- Added:
- 3/30/2017
- Last Updated:
- 12/10/2018
Operations
Publications
Mathivanan S, et al. ExoCarta 2012: database of exosomal proteins, RNA and lipids. Nucleic Acids Res. 2012; 40:D1241-4. doi: 10.1093/nar/gkr828
PMID: 21989406