FAIDARE

FAIDARE: FAIR Data-finder for Agronomic Research. The purpose of this portal is to facilitate the discoverability of public data on plant biology from a federation of established data repositories. It is based on the Breeding API (BrAPI) specifications and facilitates the access to genotype and phenotype datasets for crop and forest plants through an easy to use web interface. It also provides a standard interface that can be accessed programatically through web services. It is an extension of the generic DataDiscovery portal, a web portal that allows finding any type of data across several databases through a lightweight keyword based search. FAIDARE offers more detailed search and data retrieval capabilities and it takes advantage of the growing adoption of the BrAPI.

Topics

Collections

Details

License:
BSD-3-Clause
Maturity:
Emerging
Cost:
Free of charge
Tool Type:
api, web application
Operating Systems:
Linux
Programming Languages:
JavaScript, Java, Bash
Added:
1/20/2020
Last Updated:
9/2/2024

Operations

Data Inputs & Outputs

Data retrieval

Documentation

API documentation
https://urgi.versailles.inrae.fr/faidare/swagger-ui.html
Description of the API to access FAIDARE webservice following BRAPI API
Contributions policy
https://forgemia.inra.fr/urgi-is/faidare/blob/master/CONTRIBUTING.md
How to contribute to FAIDARE software development
User manual
https://urgi.versailles.inrae.fr/faidare/help
Tips to use the application
Contributions policy
https://urgi.versailles.inrae.fr/faidare/join
How to join the FAIDARE federation

Links

Repository
https://forgemia.inra.fr/urgi-is/faidare
(GitLab code repository for FAIDARE)
Mirror
https://github.com/elixir-europe/plant-faidare
(Code repository mirror link for FAIDARE)

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