FANet

FANet improves biomedical image segmentation by leveraging feedback attention across training epochs to iteratively refine segmentation predictions.


Key Features:

  • Epoch Information Utilization: FANet prunes prediction maps from each training epoch so information from earlier epochs contributes to subsequent training and predictions.
  • Novel Architecture: The architecture integrates the previous epoch's mask with the current epoch's feature map to apply hard attention across convolutional layers.
  • Iterative Prediction Rectification: FANet performs iterative rectification of predictions at test time, refining segmentation outputs through feedback-based iterations.

Scientific Applications:

  • Biomedical image segmentation: Improves segmentation accuracy for tasks that require precise delineation of biological structures in medical and experimental images.
  • Quantitative analysis and clinical research: Enhanced segmentation metrics facilitate downstream quantitative measurements, diagnostic interpretation, and studies of biological processes.
  • Evaluation on public datasets: Demonstrated metric improvements across seven publicly available biomedical imaging datasets.

Methodology:

The method prunes prediction maps from earlier epochs and integrates the previous-epoch mask with the current-epoch feature map to apply hard attention within convolutional layers, using this feedback mechanism to iteratively refine predictions during training and to perform iterative rectification at test time.

Topics

Details

License:
Not licensed
Tool Type:
desktop application
Programming Languages:
Python
Added:
6/25/2022
Last Updated:
11/24/2024

Operations

Publications

Tomar NK, Jha D, Riegler MA, Johansen HD, Johansen D, Rittscher J, Halvorsen P, Ali S. FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation. IEEE Transactions on Neural Networks and Learning Systems. 2023;34(11):9375-9388. doi:10.1109/tnnls.2022.3159394. PMID:35333723.

PMID: 35333723
Funding: - Norges Forskningsråd: 263248, 270053 - Research Council of Norway: 263248