FastField

FastField approximates electric fields and volumes of tissue activated (VTA) in deep brain stimulation (DBS) to enable rapid prediction of stimulation effects.


Key Features:

  • Electric-field and VTA approximation: Approximates electric fields and volumes of tissue activated (VTA) in DBS.
  • Superposition-based scaling: Implements scalable electric field approximations based on the principle of superposition.
  • Activation models: Uses VTA activation models that explicitly consider pulse width and axon diameter.
  • Computation speed: Performs individual simulations in approximately 0.2 seconds.
  • Speed versus FEM: Achieves roughly 1000× speedup compared to finite element method (FEM)-based simulations.
  • Accuracy benchmark: Delivers an average Dice overlap of 92% in benchmark tests, comparable to typical clinical data noise levels.
  • Complex geometries and configurations: Handles complex geometries and diverse electrode configurations and stimulation settings.
  • Rapid parameter tuning: Facilitates rapid parameter tuning and optimization studies through fast computation.

Scientific Applications:

  • Optimization studies: Enables efficient optimization of stimulation parameters and electrode configurations via rapid simulations.
  • Patient-specific DBS planning: Supports tailoring DBS therapies to individual patients by predicting outcomes for different electrode placements and settings.
  • Network analyses: Provides electric field and VTA estimates usable for network analyses of DBS effects.
  • Benchmarking and validation: Serves for benchmarking and validation of DBS models against FEM and clinical data.

Methodology:

Computational approach uses superposition-based electric field approximations coupled with VTA activation models that incorporate pulse width and axon diameter.

Topics

Details

License:
AGPL-3.0
Tool Type:
workflow
Programming Languages:
MATLAB
Added:
1/18/2021
Last Updated:
11/24/2024

Operations

Publications

Baniasadi M, Proverbio D, Gonçalves J, Hertel F, Husch A. FastField: An Open-Source Toolbox for Efficient Approximation of Deep Brain Stimulation Electric Fields. Unknown Journal. 2020. doi:10.1101/2020.03.03.974642.

Baniasadi M, Proverbio D, Gonçalves J, Hertel F, Husch A. FastField: An open-source toolbox for efficient approximation of deep brain stimulation electric fields. NeuroImage. 2020;223:117330. doi:10.1016/j.neuroimage.2020.117330. PMID:32890746.

PMID: 32890746
Funding: - Higher Education Discipline Innovation Project: B18024