feedr

feedr processes time-stamped, georeferenced detections from RFID and other stationary loggers to transform and visualize animal movement patterns for studies of habitat use, resource use, and social interactions.


Key Features:

  • R package implementation: Provided as an R package for programmatic data loading, transformation, and visualization workflows.
  • Data transformation: Converts raw RFID and stationary-logger detections into visits, presence (regular detections over time), movements between loggers, displacements, and activity patterns.
  • Integration with other R packages: Includes conversion functions to format data for compatibility with complementary R packages.
  • Visualization capabilities: Produces static and interactive map visualizations and time-based animations of detections and movements.
  • Supported data sources: Handles data from RFID static logger stations and other stationary sources such as hair traps, static VHF telemetry loggers, and observations of marked individuals.

Scientific Applications:

  • Animal movement analysis: Quantifies movements between logger locations and patterns of site visitation.
  • Habitat and resource use: Infers habitat or resource-use patterns from spatially and temporally resolved detections.
  • Social interaction inference: Identifies co-occurrence and temporal overlap at logger sites to support analyses of social interactions.
  • Colony and staging-site monitoring: Analyzes detections of marked individuals at colonies or staging sites to monitor presence and turnover.

Methodology:

Processes time-stamped georeferenced detections from static logger stations; transforms raw detections into visits, presence, movements, displacements, and activity patterns; provides data-format conversion functions for other R packages; and generates static/interactive maps and time-based animations.

Topics

Details

License:
GPL-3.0
Tool Type:
command-line tool
Operating Systems:
Linux, Windows
Added:
10/11/2018
Last Updated:
12/16/2018

Operations

Data Inputs & Outputs

Publications

LaZerte SE, Reudink MW, Otter KA, Kusack J, Bailey JM, Woolverton A, Paetkau M, de Jong A, Hill DJ. feedr and animalnexus.ca: A paired R package and user‐friendly Web application for transforming and visualizing animal movement data from static stations. Ecology and Evolution. 2017;7(19):7884-7896. doi:10.1002/ece3.3240. PMID:29043042. PMCID:PMC5632613.

Documentation

Links