feedr
feedr processes time-stamped, georeferenced detections from RFID and other stationary loggers to transform and visualize animal movement patterns for studies of habitat use, resource use, and social interactions.
Key Features:
- R package implementation: Provided as an R package for programmatic data loading, transformation, and visualization workflows.
- Data transformation: Converts raw RFID and stationary-logger detections into visits, presence (regular detections over time), movements between loggers, displacements, and activity patterns.
- Integration with other R packages: Includes conversion functions to format data for compatibility with complementary R packages.
- Visualization capabilities: Produces static and interactive map visualizations and time-based animations of detections and movements.
- Supported data sources: Handles data from RFID static logger stations and other stationary sources such as hair traps, static VHF telemetry loggers, and observations of marked individuals.
Scientific Applications:
- Animal movement analysis: Quantifies movements between logger locations and patterns of site visitation.
- Habitat and resource use: Infers habitat or resource-use patterns from spatially and temporally resolved detections.
- Social interaction inference: Identifies co-occurrence and temporal overlap at logger sites to support analyses of social interactions.
- Colony and staging-site monitoring: Analyzes detections of marked individuals at colonies or staging sites to monitor presence and turnover.
Methodology:
Processes time-stamped georeferenced detections from static logger stations; transforms raw detections into visits, presence, movements, displacements, and activity patterns; provides data-format conversion functions for other R packages; and generates static/interactive maps and time-based animations.
Topics
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows
- Added:
- 10/11/2018
- Last Updated:
- 12/16/2018
Operations
Data Inputs & Outputs
Aggregation
Publications
LaZerte SE, Reudink MW, Otter KA, Kusack J, Bailey JM, Woolverton A, Paetkau M, de Jong A, Hill DJ. feedr and animalnexus.ca: A paired R package and user‐friendly Web application for transforming and visualizing animal movement data from static stations. Ecology and Evolution. 2017;7(19):7884-7896. doi:10.1002/ece3.3240. PMID:29043042. PMCID:PMC5632613.