fermi-lite

Standalone C library for assembling Illumina short reads in small regions

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Topics

Bioinformatics Genomics

Details

License:: MIT
Maturity:: Mature
Tool Type:: command-line tool, library
Programming Languages:: C, C++
Added:: 6/19/2026
Last Updated:: 6/19/2026

Operations

Sequence assembly

Publications

DOI: 10.1093/bioinformatics/btv440

PMID: 26220959

PMCID: PMC4757955

Documentation

General

https://github.com/lh3/fermi-lite/blob/master/README.md

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