FINDbase
FINDbase records frequencies of causative genetic variations across global populations to support research into inherited disorders and pharmacogenomics.
Key Features:
- Global Data Coverage: Compiles genetic variation frequency data linked to disorder name, related gene, and geographical or ethnic context across diverse populations and ethnic groups worldwide.
- Pharmacogenomic Markers: Provides allele frequencies for 144 pharmacogenomic markers across 14 genes covering 150 populations and ethnic groups relevant to drug metabolism and transport.
- Data Querying and Visualization: Implements querying and visualization using Microsoft's PivotViewer built on Silverlight for exploration and visualization of dataset results.
Scientific Applications:
- Population Genetics: Characterizes population-specific frequencies of causative variants and allele distributions across ethnic groups.
- Pharmacogenomics: Assesses population allele frequencies of pharmacogenomic markers to inform studies of drug metabolism and transport genes.
- Medical Genetics of Inherited Disorders: Enables comparison of causative variant frequencies across populations to support analyses of genetic risk factor prevalence for inherited disorders.
Methodology:
Compilation of genetic variation frequency records from diverse sources, regular database updates, and integration of querying and visualization via Microsoft's PivotViewer (Silverlight).
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 4/22/2017
- Last Updated:
- 4/17/2021
Operations
Publications
Georgitsi M, et al. FINDbase: a worldwide database for genetic variation allele frequencies updated. Nucleic Acids Res. 2011; 39:D926-32. doi: 10.1093/nar/gkq1236
PMID: 21113021
Documentation
General
http://findbase.org/#