FINDbase

FINDbase records frequencies of causative genetic variations across global populations to support research into inherited disorders and pharmacogenomics.


Key Features:

  • Global Data Coverage: Compiles genetic variation frequency data linked to disorder name, related gene, and geographical or ethnic context across diverse populations and ethnic groups worldwide.
  • Pharmacogenomic Markers: Provides allele frequencies for 144 pharmacogenomic markers across 14 genes covering 150 populations and ethnic groups relevant to drug metabolism and transport.
  • Data Querying and Visualization: Implements querying and visualization using Microsoft's PivotViewer built on Silverlight for exploration and visualization of dataset results.

Scientific Applications:

  • Population Genetics: Characterizes population-specific frequencies of causative variants and allele distributions across ethnic groups.
  • Pharmacogenomics: Assesses population allele frequencies of pharmacogenomic markers to inform studies of drug metabolism and transport genes.
  • Medical Genetics of Inherited Disorders: Enables comparison of causative variant frequencies across populations to support analyses of genetic risk factor prevalence for inherited disorders.

Methodology:

Compilation of genetic variation frequency records from diverse sources, regular database updates, and integration of querying and visualization via Microsoft's PivotViewer (Silverlight).

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
4/22/2017
Last Updated:
4/17/2021

Operations

Publications

Georgitsi M, et al. FINDbase: a worldwide database for genetic variation allele frequencies updated. Nucleic Acids Res. 2011; 39:D926-32. doi: 10.1093/nar/gkq1236

PMID: 21113021

Documentation