FOD-Net

FOD-Net enhances the angular resolution of fiber orientation distribution (FOD) images from diffusion magnetic resonance imaging (dMRI) using deep learning to improve tractography and structural connectome reconstruction from clinical-grade acquisitions.


Key Features:

  • Angular Super-Resolution: Uses deep learning to perform angular super-resolution of FOD images derived from standard clinical dMRI to approximate the quality of high-resolution research acquisitions that often use multi-shell protocols.
  • Training and Validation: Trained on high-quality Human Connectome Project (HCP) data and validated on a local clinical 3.0T scanner and a public multicenter-multiscanner dataset.
  • Improved Tractography: Produces FODs that reduce spurious connections and bridge missing connections, yielding more accurate tractography and structural connectome reconstructions.
  • Clinical Applicability: Enables generation of high-quality tractography and connectome analyses from existing clinical MRI protocols without requiring advanced dMRI acquisition schemes.

Scientific Applications:

  • Neuroscience Research: Supports more precise studies of brain connectivity by enabling higher-quality FODs and tractography from clinical-grade dMRI.
  • Clinical Neuroimaging: Facilitates improved structural connectome reconstruction that may inform diagnostic assessments and therapeutic strategy development for neurological conditions.

Methodology:

FOD-Net applies deep learning-based angular super-resolution to FOD images derived from dMRI and was trained on Human Connectome Project data with validation on a local clinical 3.0T scanner and a public multicenter-multiscanner dataset.

Topics

Details

License:
CC-BY-NC-SA-4.0
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
7/29/2022
Last Updated:
11/24/2024

Operations

Publications

Zeng R, Lv J, Wang H, Zhou L, Barnett M, Calamante F, Wang C. FOD-Net: A deep learning method for fiber orientation distribution angular super resolution. Medical Image Analysis. 2022;79:102431. doi:10.1016/j.media.2022.102431. PMID:35397471.