FooDis

FooDis extracts and suggests potential causal or therapeutic relationships between food entities and disease concepts from biomedical literature.


Key Features:

  • Automated Relation Extraction: An information extraction pipeline employs natural language processing to mine textual data from biomedical abstracts for food–disease relations.
  • High Precision Predictions: Achieves a 90% match rate for common food-disease pairs against the NutriChem database and a 93% match rate against the DietRx platform.
  • Integration with Semantic Resources: Suggests candidate relations that can be compared to and used to complement semantic resources such as NutriChem and DietRx.
  • Dynamic Discovery: Continuously analyzes new scientific publications to identify emerging food-disease relationships.

Scientific Applications:

  • Nutrition Science: Supports systematic identification of diet–health associations relevant to nutritional research.
  • Epidemiology: Provides candidate food-disease relations that can inform observational and hypothesis-driven epidemiological studies.
  • Public Health: Supplies evidence for potential dietary risk or protective factors that may inform public health investigations and policy-relevant research.

Methodology:

Information extraction using state-of-the-art natural language processing to process and analyze biomedical abstracts and identify patterns and relationships between food entities and disease concepts.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
2/9/2024
Last Updated:
11/24/2024

Operations

Publications

Cenikj G, Eftimov T, Koroušić Seljak B. FooDis: A food-disease relation mining pipeline. Artificial Intelligence in Medicine. 2023;142:102586. doi:10.1016/j.artmed.2023.102586. PMID:37316100.