FooDis
FooDis extracts and suggests potential causal or therapeutic relationships between food entities and disease concepts from biomedical literature.
Key Features:
- Automated Relation Extraction: An information extraction pipeline employs natural language processing to mine textual data from biomedical abstracts for food–disease relations.
- High Precision Predictions: Achieves a 90% match rate for common food-disease pairs against the NutriChem database and a 93% match rate against the DietRx platform.
- Integration with Semantic Resources: Suggests candidate relations that can be compared to and used to complement semantic resources such as NutriChem and DietRx.
- Dynamic Discovery: Continuously analyzes new scientific publications to identify emerging food-disease relationships.
Scientific Applications:
- Nutrition Science: Supports systematic identification of diet–health associations relevant to nutritional research.
- Epidemiology: Provides candidate food-disease relations that can inform observational and hypothesis-driven epidemiological studies.
- Public Health: Supplies evidence for potential dietary risk or protective factors that may inform public health investigations and policy-relevant research.
Methodology:
Information extraction using state-of-the-art natural language processing to process and analyze biomedical abstracts and identify patterns and relationships between food entities and disease concepts.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 2/9/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Cenikj G, Eftimov T, Koroušić Seljak B. FooDis: A food-disease relation mining pipeline. Artificial Intelligence in Medicine. 2023;142:102586. doi:10.1016/j.artmed.2023.102586. PMID:37316100.
PMID: 37316100