Frealign
Frealign refines 3D reconstructions from cryo-electron microscopy (cryo-EM) single-particle images to improve resolution for macromolecular structure determination.
Key Features:
- High-Resolution Refinement: Refines 3D reconstructions to achieve higher resolution and clearer structural detail of macromolecules.
- Contrast Transfer Function (CTF) Correction: Corrects for the microscope Contrast Transfer Function (CTF) to compensate for imaging distortions.
- Optimized Algorithms: Employs optimized computational algorithms to perform refinement and related computations efficiently.
- Noise Reduction and Image Correction: Implements noise reduction and image correction to enhance map quality and reliability.
Scientific Applications:
- Single-Particle Cryo-EM Structural Determination: Used to refine single-particle cryo-EM datasets for high-resolution macromolecular structure determination.
- Macromolecular Function and Interaction Analysis: Provides refined maps that support accurate modeling of macromolecular function and interactions.
Methodology:
Computational refinement of 3D reconstructions from cryo-EM images, including CTF correction, noise reduction, and image correction using optimized algorithms.
Topics
Collections
Details
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Mac
- Programming Languages:
- Shell
- Added:
- 2/16/2015
- Last Updated:
- 11/25/2024
Operations
Data Inputs & Outputs
Image analysis
Outputs
Publications
Grigorieff N. FREALIGN: High-resolution refinement of single particle structures. Journal of Structural Biology. 2007;157(1):117-125. doi:10.1016/j.jsb.2006.05.004. PMID:16828314.
PMID: 16828314