fungal names

fungal names provides a comprehensive nomenclatural repository and knowledge base for fungal taxonomy, aggregating published fungal names, type specimen and collection records, and sequence-alignment identification resources to support accurate nomenclature and taxonomic verification.


Key Features:

  • Official repository: Fungal Names (FN) is recognized as one of three official fungal nomenclatural repositories authorized by the International Nomenclature Committee for Fungi (NCF).
  • Extensive database: Contains over 567,000 taxon names compiled from more than 10,000 journals and books published since 1596.
  • Integration with specimens and collections: Links nomenclature to type specimens/illustrations, culture collections, herbaria/fungaria and publications, including over 147,000 collection records from more than 5,000 preserving agencies worldwide.
  • Knowledge base: Encapsulates historical and recent nomenclatural information to provide contextual insights into taxonomic changes.
  • Search capabilities: Provides keyword- and strategy-based search with name categorization that adheres to established nomenclature rules.
  • Name checking tool: Includes a standardized name-checking tool to verify the accuracy of fungal names.
  • Sequence alignment-based identification: Offers an identification package based on sequence alignment to support registration and typification of nomenclatural novelties.

Scientific Applications:

  • Taxonomic revision and nomenclatural research: Supports revisionary work and verification of published fungal names and nomenclatural status.
  • Verification of type material and collections-based research: Facilitates linking names to type specimens, culture collections and herbaria records for verification and curation.
  • Sequence-based identification and typification: Enables sequence-alignment-based identification to assist registration and typification of new fungal names.
  • Historical and biodiversity studies: Aggregates literature and nomenclatural data dating back to 1596 to support historical taxonomic and biodiversity research.

Methodology:

Aggregates published names from literature and links them to specimen and collection records, implements keyword-based search and name categorization according to nomenclature rules, provides a standardized name-checking tool, and offers sequence-alignment-based identification.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
1/8/2023
Last Updated:
1/8/2023

Operations

Publications

Wang F, Wang K, Cai L, Zhao M, Kirk PM, Fan G, Sun Q, Li B, Wang S, Yu Z, Han D, Ma J, Wu L, Yao Y. Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy. Nucleic Acids Research. 2022;51(D1):D708-D716. doi:10.1093/nar/gkac926. PMID:36271801. PMCID:PMC9825588.

PMID: 36271801
Funding: - National Key Research Program of China: 2021YFF0703800 - Strategic Priority Research Program of the Chinese Academy of Sciences: XDA19050301 - Informatization Plan of Chinese Academy of Sciences: CAS-WX2021SF-0202 - International Partnership Program of Chinese Academy of Sciences: 153211KYSB 201900211