Galactic Circos

Galactic Circos generates circular visualizations for genomic analysis and other complex multidimensional datasets by wrapping the Circos plotting software within the Galaxy platform.


Key Features:

  • Galaxy integration: Wraps Circos plotting software within Galaxy to enable execution and configuration of Circos jobs in the Galaxy environment.
  • Circos plotting capabilities: Exposes Circos's plotting capabilities for creating complex circular representations of multidimensional data.
  • Large-scale genomic data support: Handles large-scale genomic datasets and supports representation of gene interactions, chromosomal aberrations, and comparative genomics.
  • Customization and extensibility: Provides downloadable Circos configuration files for manual specification and further customization of plots.
  • Publication-quality outputs: Produces visualizations suitable for use as publication figures.
  • Domain flexibility: Applicable across scientific domains that require circular or multidimensional data visualization beyond genomics.

Scientific Applications:

  • Genomic research: Visualizing relationships between large datasets such as gene interactions, chromosomal aberrations, and comparative genomics.
  • Systems biology: Representing multidimensional omics data and system-level relationships.
  • Network analysis: Depicting complex network relationships and interactions.
  • Other complex-data visualization: Supporting fields that require integration and visual representation of heterogeneous, multidimensional datasets.

Methodology:

Integration of Circos's plotting capabilities within Galaxy and generation/export of Circos configuration files to specify and customize circular plots.

Details

License:
MIT
Maturity:
Emerging
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux
Programming Languages:
Perl, Python
Added:
3/24/2020
Last Updated:
11/24/2024

Operations

Publications

Rasche H, Hiltemann S. Galactic Circos: User-friendly Circos plots within the Galaxy platform. GigaScience. 2020;9(6). doi:10.1093/gigascience/giaa065. PMID:32530465. PMCID:PMC7291503.

PMID: 32530465
PMCID: PMC7291503
Funding: - Horizon 2020: 825775

Documentation

Downloads

Links

Related Tools

galaxy
Relation: includedIn
circos
Relation: uses