GAT-FD

GAT-FD analyzes task-related functional connectivity dynamics in fMRI data using graph theoretical techniques to quantify time-varying topological properties of brain networks.


Key Features:

  • Sliding-Window Approach: Implements a sliding-window technique to capture temporal changes in functional connectivity across task conditions.
  • Task Condition File Generation: Facilitates creation of task condition files aligned to specific experimental designs.
  • Topological Measures Calculation: Calculates a range of topological properties of functional networks and tracks their dynamics over time.
  • Visual Validation: Provides visualization-based validation tools to support interpretation and assessment of analysis results.

Scientific Applications:

  • Functional connectome analysis: Quantifies large-scale brain network organization and its temporal topology during sensory and cognitive tasks.
  • Brain disorder research: Characterizes alterations in task-related functional connectivity dynamics in individuals with brain disorders.
  • Task-related network dynamics: Enables quantitative evaluation of how network topology changes across block-designed or other task paradigms.

Methodology:

The toolbox is structured into four modules: sliding-window analysis, temporal mask generation, estimation of network properties and dynamics, and result display.

Topics

Details

Tool Type:
library
Programming Languages:
MATLAB
Added:
3/19/2021
Last Updated:
3/22/2021

Operations

Publications

Cao M, Wu Z, Li X. GAT-FD: An Integrated MATLAB Toolbox for Graph Theoretical Analysis of Task-Related Functional Dynamics. Unknown Journal. 2021. doi:10.1101/2021.02.21.432161.

Links