GCAT
Genetic Code Analysis Toolkit (GCAT) which provides workflows and algorithms for the analysis of the structure of nucleotide sequences. In particular, sets or sequences of codons can be transformed and tested for circularity, comma-freeness, dichotomic partitions and others. GCAT comes with a fertile editor custom-built to work with the genetic code and a batch mode for multi-sequence processing.
Topics
Details
- License:
- Apache-2.0
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java, Scala
- Added:
- 8/23/2018
- Last Updated:
- 12/10/2018
Operations
Publications
Kraljić K, Strüngmann L, Fimmel E, Gumbel M. Genetic Code Analysis Toolkit: A novel tool to explore the coding properties of the genetic code and DNA sequences. SoftwareX. 2018;7:12-14. doi:10.1016/j.softx.2017.10.008.