GenABEL
GenABEL performs genome-wide association analyses between quantitative or binary traits and single nucleotide polymorphisms (SNPs).
Key Features:
- Association testing: Performs genome-wide association analysis between quantitative or binary traits and single nucleotide polymorphisms (SNPs).
- GWAS support: Supports various aspects of genome-wide association studies (GWAS).
- Toolset composition: Comprises eleven tools that collectively address different analytical needs in GWAS.
- Statistical genomics: Implements statistical genomics methodologies relevant to association analysis.
Scientific Applications:
- Genome-wide association studies (GWAS): Analysis of associations between SNPs and quantitative or binary phenotypes.
- Statistical genomics research: Implementation and application of statistical genomics methods within omics research contexts.
Methodology:
Development and maintenance practices explicitly include public version control, code review, and continuous integration.
Topics
Collections
Details
- License:
- CC-BY-SA-3.0
- Tool Type:
- library, workflow
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- R
- Added:
- 8/20/2017
- Last Updated:
- 9/4/2019
Operations
Data Inputs & Outputs
Publications
Karssen LC, van Duijn CM, Aulchenko YS. The GenABEL Project for statistical genomics. F1000Research. 2016;5:914. doi:10.12688/f1000research.8733.1. PMID:27347381. PMCID:PMC4916982.