GenomeThreader
Software tool to compute gene structure predictions. The gene structure predictions are calculated using a similarity-based approach where additional cDNA/EST and/or protein sequences are used to predict gene structures via spliced alignments.
Topics
Collections
Details
- License:
- Not licensed
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- C
- Added:
- 8/20/2017
- Last Updated:
- 1/19/2020
Operations
Data Inputs & Outputs
Publications
Gremme G, Brendel V, Sparks ME, Kurtz S. Engineering a software tool for gene structure prediction in higher organisms. Information and Software Technology. 2005;47(15):965-978. doi:10.1016/j.infsof.2005.09.005.