GeomxTools

Tools for NanoString Technologies GeoMx Technology. Package provides functions for reading in DCC and PKC files based on an ExpressionSet derived object. Normalization and QC functions are also included.

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Topics

Endocrinology and metabolism Molecular interactions, pathways and networks Multiomics RNA-Seq Transcriptomics

Collections

BioConductor

Details

License:: MIT
Programming Languages:: R
Added:: 2/22/2026
Last Updated:: 9/1/2026

Operations

Differential gene expression profiling
Gene-set enrichment analysis
Standardisation and normalisation

Publications

DOI: 10.18129/B9.bioc.GeomxTools

Documentation

User manual

https://bioconductor.org/packages/GeomxTools

Downloads

Source code
https://bioconductor.org/packages/release/bioc/src/contrib/GeomxTools_3.16.0.tar.gz

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