GFNet

GFNet performs automatic segmentation of COVID-19 lung infections from chest CT images to delineate infected regions and enhance boundary detection.


Key Features:

  • VGG16 Backbone: Uses VGG16 for hierarchical feature extraction from CT slices.
  • Edge-guidance Module (Eg): Fuses features from each layer to emphasize boundary details and improve segmentation of fuzzy boundaries.
  • Reverse Attention Mechanism: Applies reverse attention to refine features and improve identification of infection boundaries before integration with the Edge-guidance outputs.
  • Multi-layer Feature Fusion: Integrates multi-layer outputs into a final segmentation map for comprehensive delineation of infected areas.
  • Deep learning-based segmentation: Employs a deep neural network architecture to automatically segment infected regions in CT images.
  • Robustness to variability and low contrast: Targets high variability in infection characteristics and low contrast between infected and normal lung tissues.

Scientific Applications:

  • COVID-19 lung infection segmentation: Automatic and precise delineation of infected regions in chest CT images to support radiological assessment.
  • Benchmarking and evaluation: Performance evaluated against UNet, UNet++, Inf-Net and few-shot learning methods using Dice coefficient, Sensitivity, and Specificity.
  • Generalization testing: Assessed on a "never seen" dataset to evaluate generalization across datasets.

Methodology:

Feature extraction with a VGG16 backbone; fusion across layers via an Edge-guidance module emphasizing boundaries; refinement using a reverse attention mechanism and multi-layer feature fusion to produce the final segmentation.

Topics

Collections

Details

License:
Not licensed
Tool Type:
command-line tool
Programming Languages:
Python, MATLAB
Added:
10/13/2022
Last Updated:
10/13/2022

Operations

Publications

Fan C, Zeng Z, Xiao L, Qu X. GFNet: Automatic segmentation of COVID-19 lung infection regions using CT images based on boundary features. Pattern Recognition. 2022;132:108963. doi:10.1016/j.patcog.2022.108963. PMID:35966970. PMCID:PMC9359771.