ggpubfigs
ggpubfigs provides curated colorblind-friendly palettes and ggplot2 extensions in R to generate publication-quality figures for quantitative scientific data visualization.
Key Features:
- Colorblind-Friendly Palettes: Provides curated color palettes optimized for visibility across multiple types of color vision deficiencies.
- ggplot2 Extensions: Supplies ggplot2 extensions that streamline generation and customization of publication-quality figures from quantitative data.
Scientific Applications:
- Data Communication: Produces accessible, publication-ready figures that aid clear presentation of complex quantitative data in scientific publications.
- Bioinformatics Research: Supports visualization of large bioinformatics datasets through customizable, publication-quality plots.
Methodology:
Integrates advanced color theory with ggplot2's plotting capabilities to provide color-accessible palettes and plotting extensions that address color accessibility and graphic quality.
Topics
Details
- License:
- Other
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 5/7/2022
- Last Updated:
- 5/7/2022
Operations
Data Inputs & Outputs
Quantification
Inputs
Outputs
Publications
Steenwyk JL, Rokas A. ggpubfigs: Colorblind-Friendly Color Palettes and ggplot2 Graphic System Extensions for Publication-Quality Scientific Figures. Microbiology Resource Announcements. 2021;10(44). doi:10.1128/mra.00871-21. PMID:34734767. PMCID:PMC8567791.
DOI: 10.1128/MRA.00871-21
PMID: 34734767
PMCID: PMC8567791
Funding: - National Science Foundation: DEB-1442113, DEB-2110404
- HHS | NIH | National Institute of Allergy and Infectious Diseases: R56 AI146096
- Howard Hughes Medical Institute: Gilliam Fellowship Program