ggseqlogo
ggseqlogo is an R tool that extends ggplot2 drawing Sequence Logos. The ggseqlogo functions include modification of color schemes, fonts, generation of multi logo plots, and annotations.
Topic
Data visualisation;Sequencing;Sequence analysis
Detail
Operation: Sequence visualisation
Software interface: Library
Language: R
License: GNU LIBRARY GENERAL PUBLIC LICENSE >= v 2
Cost: Free
Version name: 0.1
Credit: -
Input: -
Output: -
Contact: Omar Wagih wagih@ebi.ac.uk
Collection: -
Maturity: Stable
Publications
- ggseqlogo: a versatile R package for drawing sequence logos.
- Wagih O. ggseqlogo: a versatile R package for drawing sequence logos. Bioinformatics. 2017 Nov 15;33(22):3645-3647. doi: 10.1093/bioinformatics/btx469. PMID: 29036507.
- https://doi.org/10.1093/bioinformatics/btx469
- PMID: 29036507
- PMC: -
Download and documentation
Source: https://cran.r-project.org/src/contrib/ggseqlogo_0.1.tar.gz
Documentation: https://cran.r-project.org/web/packages/ggseqlogo/ggseqlogo.pdf
Home page: https://cran.r-project.org/web/packages/ggseqlogo/
Links: https://cran.r-project.org/web/packages/ggseqlogo/vignettes/ggseqlogo_introduction.html
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