GlioMarker

GlioMarker provides an integrated database for exploring diagnostic biomarkers in gliomas to support biomarker discovery and assessment of clinical application.


Key Features:

  • Comprehensive Data Compilation: Compiles data from 1,559 publications covering 406 glioma diagnostic biomarkers, including biomarker descriptions, associated clinical information, literature references, experimental records, related diseases, and statistical indicators.
  • Integration with External Resources: Integrates numerous external resources to enrich biomarker annotations and related information.
  • Ontology Annotations: Supplies extensive ontology annotations for each biomarker to clarify biological context and function.
  • Relationship Mapping: Identifies and maps relationships among drugs, genes, and variants relevant to glioma pathology.
  • Clinical Application Analysis: Performs analysis of genomic and expression data from glioma cohort studies to assess the clinical application value of diagnostic biomarkers.

Scientific Applications:

  • Biomarker Characterization: Enhance understanding of glioma biology through detailed analysis of diagnostic biomarkers.
  • Precision Medicine Support: Facilitate development of personalized treatment plans by linking biomarkers to drugs, genes, and variants.
  • Genomic Research: Support genomic and expression studies to identify and prioritize novel therapeutic targets.

Methodology:

Compilation of data from 1,559 publications; integration of external resources and ontology annotations; identification and mapping of relationships among drugs, genes, and variants; and analysis of genomic and expression data from glioma cohort studies.

Topics

Details

License:
MIT
Cost:
Free of charge
Tool Type:
desktop application, web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript
Added:
11/4/2022
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Literature search

Publications

Ran Z, Yang J, Liu Y, Chen X, Ma Z, Wu S, Huang Y, Song Y, Gu Y, Zhao S, Fa M, Lu J, Chen Q, Cao Z, Li X, Sun S, Yang T. GlioMarker: An integrated database for knowledge exploration of diagnostic biomarkers in gliomas. Frontiers in Oncology. 2022;12. doi:10.3389/fonc.2022.792055. PMID:36081550. PMCID:PMC9446481.

Links