GoldVariants
GoldVariants facilitates sharing and curation of rare genetic variants associated with bleeding, thrombotic, and platelet disorders (BTPD) to support interpretation of high-throughput sequencing (HTS)-derived diagnostic-grade variants.
Key Features:
- Curated diagnostic-grade variants: Collects and curates diagnostic-grade genetic variants associated with BTPD with involvement from the Scientific and Standardization Committee for Genetics in Thrombosis and Haemostasis.
- HTS support: Captures variants identified through high-throughput sequencing (HTS) technologies used in research and diagnostic laboratories.
- Variant classification criteria: Integrates evidence-based criteria including variant consequence, frequency in control datasets, number of reported patients, prediction models, and functional assays for pathogenicity assessment.
- International dataset: Contains an initial set of 821 curated variants submitted from 30 centers across 14 countries.
- ClinVar data exchange: Performs regular bulk data transfer of variant records to ClinVar to contribute findings to broader variant databases.
Scientific Applications:
- Diagnostic advancements: Supports clinical interpretation of HTS-derived variants for more accurate diagnosis of BTPD.
- Research development: Enables studies of the genetic underpinnings of bleeding, thrombotic, and platelet disorders and exploration of potential therapeutic targets.
- Collaborative studies: Facilitates international collaboration and data sharing among researchers and clinicians focused on hemostatic disorders.
Methodology:
Integration of evidence-based criteria (variant consequence, frequency in control datasets, number of reported patients, prediction models, functional assays) and regular bulk data transfer of variant records to ClinVar.
Topics
Collections
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 1/26/2023
- Last Updated:
- 1/26/2023
Operations
Publications
Megy K, Downes K, Morel‐Kopp M, Bastida JM, Brooks S, Bury L, Leinoe E, Gomez K, Morgan NV, Othman M, Ouwehand WH, Perez Botero J, Rivera J, Schulze H, Trégouët D, Freson K. GoldVariants, a resource for sharing rare genetic variants detected in bleeding, thrombotic, and platelet disorders: Communication from the ISTH SSC Subcommittee on Genomics in Thrombosis and Hemostasis. Journal of Thrombosis and Haemostasis. 2021;19(10):2612-2617. doi:10.1111/jth.15459. PMID:34355501. PMCID:PMC9291976.