GridScore
GridScore facilitates standardized phenotypic data collection and visualization to support plant breeding and crop research.
Key Features:
- Web Technology Integration: Uses web technologies to replicate printed field plans and present a top-down overview of field layouts.
- Georeferencing: Integrates georeferencing to record spatial coordinates alongside phenotypic observations.
- Image Tagging: Associates tagged images with plot identifiers and trait observations for visual documentation.
- Speech Recognition: Incorporates speech recognition to capture verbal phenotype annotations.
- Barcode-Based Systems: Links plant varieties and trial plots to recorded data via barcode identification.
- Guided Data Collection: Implements guided workflows to structure phenotyping protocols and trait scoring.
- Data Visualization: Visualizes phenotypic measurements and previously recorded data within field-layout views.
Scientific Applications:
- Plant Breeding Trials: Captures trait data across plant varieties for breeding experiments and trial evaluations.
- Large-Scale Phenotyping: Supports field phenotyping trials that assess multiple traits across many plots.
- Genetic Mapping and Association Studies: Produces phenotype datasets suitable for genetic mapping and association analyses.
- Selection and Crop Improvement: Provides phenotype records that inform selection decisions and crop improvement strategies.
Methodology:
Combines barcode-based systems with a structured data collection methodology, uses web technologies to present a top-down field-plan view, and integrates georeferencing, image tagging, speech recognition, and previously recorded data to identify plots requiring further scoring.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 9/16/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Raubach S, Schreiber M, Shaw PD. GridScore: a tool for accurate, cross-platform phenotypic data collection and visualization. BMC Bioinformatics. 2022;23(1). doi:10.1186/s12859-022-04755-2. PMID:35668357. PMCID:PMC9169276.
PMID: 35668357
PMCID: PMC9169276
Funding: - Biotechnology and Biological Sciences Research Council: BB/S004610/1