GRINdb
GRINdb curates and aggregates genetic, functional, and clinical variant data for GRIN genes encoding N-methyl-D-aspartate receptor (NMDAR) subunits to support interpretation of variants affecting glutamatergic neurotransmission.
Key Features:
- Curated Repository: Consolidates data from over 4,000 GRIN variants into a unified, nonredundant collection of genetic, functional, and clinical information.
- Clinical Relevance: Supports molecular stratification of patients with GRIN-related disorders (GRDs), including rare pediatric neurological conditions caused by NMDAR dysfunction.
- Pathogenicity Mapping: Maps genetic and clinical information of GRIN variants onto the N-methyl-D-aspartate receptor (NMDAR) structure to reveal differences in pathogenicity and associated clinical phenotypes.
- Facilitates Patient Stratification: Bridges variant identification and patient stratification to inform molecular clinical advice and research into GRDs.
Scientific Applications:
- Genotype–Phenotype Correlation: Enables analysis of correlations between specific GRIN variants and clinical phenotypes in GRDs.
- Functional Impact Investigation: Supports investigation of the functional consequences of individual GRIN variants on NMDAR subunits.
- Therapeutic Strategy Development: Provides variant-level data to inform development of targeted therapeutic strategies for NMDAR-related pathologies.
- Clinical Interpretation: Informs diagnostic assessment and personalized treatment planning through integrated genetic, functional, and clinical evidence.
Methodology:
Rigorous manual curation of genetic, clinical, and functional data for GRIN gene variants; mapping of genetic and clinical variant data onto N-methyl-D-aspartate receptor (NMDAR) structural models.
Topics
Details
- Tool Type:
- web application
- Added:
- 1/18/2021
- Last Updated:
- 1/25/2021
Operations
Publications
García‐Recio A, Santos‐Gómez A, Soto D, Julia‐Palacios N, García‐Cazorla À, Altafaj X, Olivella M. <i>GRIN</i> database: A unified and manually curated repertoire of <i>GRIN</i> variants. Human Mutation. 2020;42(1):8-18. doi:10.1002/humu.24141. PMID:33252190.