Gviz

Genomic data analyses requires integrated visualization of known genomic information and new experimental data. This package uses the biomaRt and the rtracklayer packages to perform live annotation queries to Ensembl and UCSC and translates this to e.g. gene/transcript structures in viewports of the grid graphics package. This results in genomic information plotted together with your data.

Topics

Collections

Details

License:
Artistic-2.0
Tool Type:
command-line tool, library
Operating Systems:
Windows, Mac
Programming Languages:
R
Added:
1/17/2017
Last Updated:
12/10/2018

Operations

Publications

(None). Statistical Genomics. Methods and Protocols. Anticancer Res. 2016; 36:3224.

PMID: 27272860

Documentation

Downloads