HAMdb
HAMdb catalogs human autophagy modulators and their annotations to support research on autophagy mechanisms, pathways, and disease associations.
Key Features:
- Content scope: Curated information on autophagy modulators including proteins, chemicals, and microRNAs and their associated pathways and disease contexts.
- Entry counts: Contains detailed entries for 796 proteins, 841 chemicals, and 132 microRNAs.
- Annotations: Entries are annotated with specific effects on autophagy, physicochemical properties, biological functions, and related disease information.
- Curation: Data were compiled through manual curation to ensure accuracy and relevance.
- Pathway and disease linkage: Consolidates pathway and disease information related to autophagy modulators.
- Cross-references: Provides external links to additional biomedical resources and references.
Scientific Applications:
- Drug discovery: Facilitates identification of candidate autophagy modulators for therapeutic development.
- Target identification: Supports discovery of diagnostic markers and therapeutic targets related to autophagy.
- Mechanistic studies: Enables investigation of modulators' effects on autophagy pathways and biological functions.
- Disease research: Supports research into autophagy involvement in metabolic conditions, neurodegenerative diseases, cancers, and infectious diseases.
Methodology:
Data were compiled through manual curation and annotated with effects on autophagy, physicochemical properties, biological functions, and pathway and disease associations.
Topics
Details
- License:
- CC-BY-4.0
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/24/2018
- Last Updated:
- 11/25/2024
Operations
Publications
Wang N, Dong J, Zhang L, Ouyang D, Cheng Y, Chen AF, Lu A, Cao D. HAMdb: a database of human autophagy modulators with specific pathway and disease information. Journal of Cheminformatics. 2018;10(1). doi:10.1186/s13321-018-0289-4. PMID:30066211. PMCID:PMC6068059.
PMID: 30066211
PMCID: PMC6068059
Funding: - National Key Basic Research Program: 2015CB910700
- National Natural Science Foundation of China: 81402853, 81501619