HAMdb

HAMdb catalogs human autophagy modulators and their annotations to support research on autophagy mechanisms, pathways, and disease associations.


Key Features:

  • Content scope: Curated information on autophagy modulators including proteins, chemicals, and microRNAs and their associated pathways and disease contexts.
  • Entry counts: Contains detailed entries for 796 proteins, 841 chemicals, and 132 microRNAs.
  • Annotations: Entries are annotated with specific effects on autophagy, physicochemical properties, biological functions, and related disease information.
  • Curation: Data were compiled through manual curation to ensure accuracy and relevance.
  • Pathway and disease linkage: Consolidates pathway and disease information related to autophagy modulators.
  • Cross-references: Provides external links to additional biomedical resources and references.

Scientific Applications:

  • Drug discovery: Facilitates identification of candidate autophagy modulators for therapeutic development.
  • Target identification: Supports discovery of diagnostic markers and therapeutic targets related to autophagy.
  • Mechanistic studies: Enables investigation of modulators' effects on autophagy pathways and biological functions.
  • Disease research: Supports research into autophagy involvement in metabolic conditions, neurodegenerative diseases, cancers, and infectious diseases.

Methodology:

Data were compiled through manual curation and annotated with effects on autophagy, physicochemical properties, biological functions, and pathway and disease associations.

Topics

Details

License:
CC-BY-4.0
Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
8/24/2018
Last Updated:
11/25/2024

Operations

Publications

Wang N, Dong J, Zhang L, Ouyang D, Cheng Y, Chen AF, Lu A, Cao D. HAMdb: a database of human autophagy modulators with specific pathway and disease information. Journal of Cheminformatics. 2018;10(1). doi:10.1186/s13321-018-0289-4. PMID:30066211. PMCID:PMC6068059.

PMID: 30066211
PMCID: PMC6068059
Funding: - National Key Basic Research Program: 2015CB910700 - National Natural Science Foundation of China: 81402853, 81501619

Documentation