Haplotyper

Genotype Transposer is an excel macro that will format data from an Excel spreadsheet to a format ready to be used by the program “Arlequin“. After which, other macros will extract the haplotype information, calculate linkage disequilibrium between markers, and prepare an input sheet for the “GOLD” program. Then, a last macro can reconstruct the haplotypes of each individual in the population,using a maximum likelihood method and the haplotypes present in the population as proposed by Arlequin.