hCoronavirusesDB

hCoronavirusesDB provides a curated repository of nucleotide and protein sequences and experimentally validated B cell and T cell epitope data for SARS-CoV, SARS-CoV-2, and MERS-CoV to support molecular surveillance and genetic and immunogenic analyses.


Key Features:

  • Extensive Sequence Data: Comprehensive repository of nucleotide and protein sequences for SARS-CoV, SARS-CoV-2, and MERS-CoV enabling comparative genetic analyses.
  • Bioinformatics Analytics and Visualization Tools: Integrated bioinformatics analytics and visualization tools for sequence analysis and evolutionary tracking.
  • Curated Epitope Data: Contains curated, experimentally validated B cell and T cell epitope data for immunological and vaccine-related analyses.

Scientific Applications:

  • Molecular Surveillance and Monitoring: Tracing viral circulation and microevolutionary changes through sequence comparison and variant tracking.
  • Vaccine and Therapeutic Development: Identifying immunogenic targets and supporting rational vaccine and therapeutic design using sequence and epitope data.
  • Diagnostic Tool Development: Supporting development of pan-coronavirus diagnostic assays through comparative sequence and epitope information.

Methodology:

Maintains a repository of nucleotide and protein sequences, integrates bioinformatics analytics and visualization tools for sequence and evolutionary analyses, and curates experimentally validated B cell and T cell epitope data.

Topics

Collections

Details

License:
Apache-2.0
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript, Python
Added:
6/27/2022
Last Updated:
11/24/2024

Operations

Publications

Almansour I, Boudellioua I. hCoronavirusesDB: an integrated bioinformatics resource for human coronaviruses. Database. 2022;2022. doi:10.1093/database/baac017. PMID:35348639. PMCID:PMC9216473.

PMID: 35348639
PMCID: PMC9216473
Funding: - King Abdulaziz City for Science and Technology: 5-20-01-070-0014

Links