HPV-Meta

A pipeline to detect human papillomavirus (HPV) transcripts in RNA sequencing (RNA-seq) data. Designed to enhance the accuracy of HPV detection and minimise false positives due to contamination, HPV-meta is particularly valuable in cancer genomics research. Ure A, Mukhedkar D, Arroyo Mühr LS. Using HPV-meta for human papillomavirus RNA quality detection. Scientific Reports. 2022 Jul 29;12(1):13058. doi:10.1038/s41598-022-17318-5.