HTML5 PivotViewer

HTML5 PivotViewer visualizes and organizes large biological image datasets together with associated metadata to support pattern detection and comparative analysis.


Key Features:

  • Image–metadata integration: Associates images with structured metadata to enable integrated filtering and analysis.
  • Large-scale dataset support: Handles extensive collections of biological images to facilitate pattern recognition and comparative analysis across datasets.
  • HTML5-based architecture: Uses HTML5 and related web technologies to provide a cross-platform, browser-executable implementation.

Scientific Applications:

  • Bioimage analysis: Visualization and analytical exploration of large biological image collections to reveal patterns and correlations.
  • Genomics: Supports image-based investigations and visualization tasks relevant to genomics research.
  • Proteomics: Supports image-based investigations and visualization tasks relevant to proteomics research.
  • Cellular biology: Supports image-based investigations and visualization tasks relevant to cellular biology research.

Methodology:

Implements HTML5 and related web technologies to link images with structured metadata, enabling computational analyses such as pattern recognition and comparative analysis.

Topics

Details

Tool Type:
command-line tool
Operating Systems:
Linux
Programming Languages:
Perl, Python
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Taylor S, Noble R. HTML5 PivotViewer: high-throughput visualization and querying of image data on the web. Bioinformatics. 2014;30(18):2691-2692. doi:10.1093/bioinformatics/btu349. PMID:24849578. PMCID:PMC4155252.

Documentation

Links