HybridVel
HybridVel computes blood velocity from space-time vascular images using Sobel filtering and an iterative Radon transform to quantify red blood cell (RBC) streak angles for fMRI and vascular imaging analysis.
Key Features:
- Hybrid Image Filtering: Applies a Sobel filter as a pre-processing step to enhance contrast and reduce noise in images containing red blood cell (RBC) streaks.
- Iterative Radon Transform: Uses iterative application of the Radon transform to convert space-time streak angles into quantitative blood velocity measurements.
- Trade-off Management: Balances measurement precision and processing speed via the iterative approach, achieving approximately an order of magnitude acceleration relative to conventional Radon-based methods while improving precision.
- Robustness Against Artifacts: Mitigates effects of low image contrast, imaging depth limitations, acquisition speed constraints, and movement artifacts encountered in large mammals.
- No A Priori Angle Information Required: Operates without pre-existing angle information and accepts space-time images from line-scan imaging or reconstructed full-frame, time-lapse vasculature images.
Scientific Applications:
- Hemodynamic mapping in fMRI: Quantifies vessel-specific blood velocity to support interpretation of hemodynamic signals associated with neural activity in fMRI studies.
- Cardiovascular research: Measures blood flow dynamics in individual vessels for studies of vascular physiology and pathology.
- Vascular imaging analysis across modalities: Processes space-time line-scan and reconstructed time-lapse vasculature images to enable precise vascular imaging analysis across imaging modalities.
Methodology:
Pre-processes images with a Sobel filter to enhance RBC streaks, constructs space-time images containing RBC streaks, and applies an iterative Radon transform that maps streak angles to velocity without requiring a priori angle information; the iterative scheme improves precision and speeds processing by approximately an order of magnitude and includes measures to mitigate low contrast, imaging depth limitations, acquisition speed constraints, and movement artifacts.
Topics
Collections
Details
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- library
- Operating Systems:
- Windows, Linux, Mac
- Programming Languages:
- MATLAB
- Added:
- 5/5/2021
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Image analysis
Inputs
Outputs
Publications
Chhatbar PY, Kara P. Improved blood velocity measurements with a hybrid image filtering and iterative Radon transform algorithm. Frontiers in Neuroscience. 2013;7. doi:10.3389/fnins.2013.00106. PMID:23807877. PMCID:PMC3684769.