ICLRBBN

ICLRBBN predicts potential associations between long non-coding RNAs (lncRNAs) and human diseases using internal confidence-based collaborative filtering and a three-layer local radial basis function network to quantify association probabilities.


Key Features:

  • Internal Confidence-Based Collaborative Filtering: Employs an internal confidence-based collaborative filtering recommendation algorithm to mine hidden features between lncRNAs and diseases.
  • Three-Layer Local Radial Basis Function Network: Implements a three-layer local radial basis function network that integrates lncRNA characteristics and localized disease information to calculate association probabilities.
  • Superior Predictive Performance: Validated against six state-of-the-art methods using two different frameworks and demonstrates higher area under the receiver operating characteristic curve (AUC) values.

Scientific Applications:

  • lncRNA–disease association prediction: Prioritizes candidate lncRNA-disease associations for downstream experimental validation.
  • Biological network analysis: Supports exploration of lncRNA-related biological networks underlying complex diseases.
  • Therapeutic target identification: Aids identification of novel insights and candidate therapeutic targets linked to lncRNA-disease relationships.

Methodology:

The method mines hidden features using an internal confidence-based collaborative filtering recommendation algorithm and constructs a three-layer local radial basis function network that integrates lncRNA characteristics with localized disease data to calculate association probabilities.

Topics

Details

Tool Type:
web application
Added:
3/19/2021
Last Updated:
3/31/2021

Operations

Publications

Wang Y, Li H, Kuang L, Tan Y, Li X, Zhang Z, Wang L. ICLRBBN: a tool for accurate prediction of potential lncRNA disease associations. Molecular Therapy - Nucleic Acids. 2021;23:501-511. doi:10.1016/j.omtn.2020.12.002. PMID:33510939. PMCID:PMC7806946.

PMID: 33510939
PMCID: PMC7806946
Funding: - National Natural Science Foundation of China: 61672447, 61873221 - Natural Science Foundation of Hunan Province: 2018JJ4058, 2019JJ70010