ICSC
ICSC identifies brain functional modules from dense weighted connectivity matrices derived from resting-state functional Magnetic Resonance Imaging (fMRI) scans by iteratively reconciling subject-level and group-level module assignments to capture individual differences in brain architecture.
Key Features:
- Iterative Consensus Approach: Employs an iterative process to minimize the consensus-cost between individual and group-level modules, reconciling subject-specific and group-level assignments.
- Dense Weighted Connectivity Matrices: Processes dense weighted connectivity matrices derived from multiple resting-state fMRI scans to represent brain functional networks.
- Subject-Level and Group-Level Analysis: Derives subject-level modules from multiple scans of the same individual and computes group-level modules reflecting collective architecture across subjects.
- Biologically Plausible Modularizations: Produces modular structures with stable visual and motor modules across subjects and lower variability across multiple scans within the same subject.
- Comparative Performance: Detects group-level modules that more accurately represent individual variations within a population compared to existing methods.
- Application in Personalized Neuroscience: Supports personalized neuroscience by capturing individual-specific brain architectures from fMRI-derived connectivity.
Scientific Applications:
- Large-scale brain imaging: Applicable to analyses of large-scale datasets such as the Human Connectome Project for population-level and individual-level investigations.
- Individual differences in brain function: Enables exploration of heterogeneous variability in modular structures and individual differences in brain connectivity.
- Personalized medicine and neuroscience research: Facilitates personalized neuroscience and potential personalized medicine studies by identifying individual-specific connectivity patterns.
Methodology:
Derives dense weighted connectivity matrices from resting-state fMRI scans and iteratively refines module assignments to minimize discrepancies between subject-specific and group-level modules.
Topics
Details
- Tool Type:
- command-line tool
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 2/2/2021
Operations
Publications
Gupta S, Rajapakse JC. Iterative consensus spectral clustering improves detection of subject and group level brain functional modules. Scientific Reports. 2020;10(1). doi:10.1038/s41598-020-63552-0. PMID:32371990. PMCID:PMC7200822.