ICSC

ICSC identifies brain functional modules from dense weighted connectivity matrices derived from resting-state functional Magnetic Resonance Imaging (fMRI) scans by iteratively reconciling subject-level and group-level module assignments to capture individual differences in brain architecture.


Key Features:

  • Iterative Consensus Approach: Employs an iterative process to minimize the consensus-cost between individual and group-level modules, reconciling subject-specific and group-level assignments.
  • Dense Weighted Connectivity Matrices: Processes dense weighted connectivity matrices derived from multiple resting-state fMRI scans to represent brain functional networks.
  • Subject-Level and Group-Level Analysis: Derives subject-level modules from multiple scans of the same individual and computes group-level modules reflecting collective architecture across subjects.
  • Biologically Plausible Modularizations: Produces modular structures with stable visual and motor modules across subjects and lower variability across multiple scans within the same subject.
  • Comparative Performance: Detects group-level modules that more accurately represent individual variations within a population compared to existing methods.
  • Application in Personalized Neuroscience: Supports personalized neuroscience by capturing individual-specific brain architectures from fMRI-derived connectivity.

Scientific Applications:

  • Large-scale brain imaging: Applicable to analyses of large-scale datasets such as the Human Connectome Project for population-level and individual-level investigations.
  • Individual differences in brain function: Enables exploration of heterogeneous variability in modular structures and individual differences in brain connectivity.
  • Personalized medicine and neuroscience research: Facilitates personalized neuroscience and potential personalized medicine studies by identifying individual-specific connectivity patterns.

Methodology:

Derives dense weighted connectivity matrices from resting-state fMRI scans and iteratively refines module assignments to minimize discrepancies between subject-specific and group-level modules.

Topics

Details

Tool Type:
command-line tool
Programming Languages:
Python
Added:
1/18/2021
Last Updated:
2/2/2021

Operations

Publications

Gupta S, Rajapakse JC. Iterative consensus spectral clustering improves detection of subject and group level brain functional modules. Scientific Reports. 2020;10(1). doi:10.1038/s41598-020-63552-0. PMID:32371990. PMCID:PMC7200822.

PMID: 32371990
PMCID: PMC7200822
Funding: - Ministry of Education - Singapore: RG 149/17