IDDB

IDDB curates genetic and clinical data on human infertility to support analysis of genetic determinants and clinical characteristics of reproductive disorders.


Key Features:

  • Comprehensive Gene Repository: Contains 307 genes associated with human infertility and 1348 genes linked to reproductive disorders across nine model organisms.
  • Chromosomal Abnormalities Data: Documents 202 chromosomal abnormalities contributing to human infertility, including aneuploidies and structural variants.
  • Pathogenic Variants Collection: Aggregates 2078 pathogenic variants from patient samples associated with 60 diseases causing infertility.
  • Clinical Characteristics Documentation: Links causative variants with laboratory indices and clinical manifestations from diagnosed infertility patients.

Scientific Applications:

  • Genetic mechanism research: Facilitates investigation of genetic mechanisms underlying infertility using gene and variant data across humans and model organisms.
  • Clinical interpretation and diagnosis: Supports clinical interpretation by associating pathogenic variants and chromosomal abnormalities with patient laboratory indices and clinical manifestations.
  • Translational research: Enables linking disease phenotypes with genetic determinants to inform treatment strategies and translational studies.

Methodology:

Data were compiled via rigorous manual curation involving systematic collection and organization of genes, chromosomal abnormalities, pathogenic variants, and clinical characteristics.

Topics

Details

Tool Type:
api
Added:
1/18/2021
Last Updated:
11/24/2024

Operations

Publications

Wu J, Li D, Liu X, Li Q, He X, Wei J, Li X, Li M, Rehman AU, Xia Y, Wu C, Zhang J, Lu X. IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility. Nucleic Acids Research. 2020;49(D1):D1218-D1224. doi:10.1093/nar/gkaa753. PMID:32941628. PMCID:PMC7779019.

PMID: 32941628
PMCID: PMC7779019
Funding: - National Natural Science Foundation of China: 21778037, 81603023, 81721004, 81873856, 81925034 - Two-hundred Talent: 20191814 - Shanghai Health and Family Planning Commission: 2017YFC0908502, 20184Y0268 - Chinese National Precise Medical Research: 2017YFC0908500 - Shanghai Municipal Education Commission: 2019-01-07-00-01-E00036 - Shanghai Science and Technology Innovation: 19431901600 - Shanghai Health and Family Planning System Excellent Subject Leader and Excellent Young Medical Talents Training Program: 2018BR12, 2018ZX09711002-001-006 - Key New Drug Creation and Manufacturing Program: 2018ZX09711002 - Clinical Rese Clinical Research Program of 9th People's Hospital: JYLJ035